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single cell rna sequencing scrna seq platforms  (10X Genomics)

 
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    10X Genomics single cell rna sequencing scrna seq platforms
    Single Cell Rna Sequencing Scrna Seq Platforms, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/single+cell+rna+sequencing+scrna+seq+platforms/chromium+system/pm42106556-2-20-25
    Average 86 stars, based on 1 article reviews
    single cell rna sequencing scrna seq platforms - by Bioz Stars, 2026-10
    86/100 stars

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    Related Articles

    Flow Cytometry:

    Article Title: Benchmarking plant single cell RNA-sequencing sample processing strategies.
    Article Snippet: .. Here, we systematically compared protoplast enrichment technologies (including conventional and image-based flow cytometry, as well as magnetic cell sorting) and single-cell RNA sequencing (scRNA-seq) platforms (10X Genomics Chromium, BD Rhapsody) using Arabidopsis roots. ..

    FACS:

    Article Title: Benchmarking plant single cell RNA-sequencing sample processing strategies.
    Article Snippet: .. Here, we systematically compared protoplast enrichment technologies (including conventional and image-based flow cytometry, as well as magnetic cell sorting) and single-cell RNA sequencing (scRNA-seq) platforms (10X Genomics Chromium, BD Rhapsody) using Arabidopsis roots. ..

    Single Cell:

    Article Title: Benchmarking plant single cell RNA-sequencing sample processing strategies.
    Article Snippet: .. Here, we systematically compared protoplast enrichment technologies (including conventional and image-based flow cytometry, as well as magnetic cell sorting) and single-cell RNA sequencing (scRNA-seq) platforms (10X Genomics Chromium, BD Rhapsody) using Arabidopsis roots. ..

    RNA Sequencing:

    Article Title: Benchmarking plant single cell RNA-sequencing sample processing strategies.
    Article Snippet: .. Here, we systematically compared protoplast enrichment technologies (including conventional and image-based flow cytometry, as well as magnetic cell sorting) and single-cell RNA sequencing (scRNA-seq) platforms (10X Genomics Chromium, BD Rhapsody) using Arabidopsis roots. ..



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    ( A ) Volcano plot of selected genes enriched in sentinel AIM + (CD25 + OX40 + ) CCR6 + cells relative to sentinel AIM − (CD25 − OX40 − ) CCR6 + CD4 + T cells identified by bulk <t>RNA-seq</t> ( n = 1 individual). Dotted line indicates criteria threshold of −log 10 (0.05) FDR and at least a log 2 fold change of −1 or 1. ( B ) FACS plots and ( C ) frequency of CD26 hi CD39 − and CD39 + populations among bulk or AIM + (CD25 + OX40 + ) Tmem ( n = 6 individuals). ( D ) UMAP plots of the single-cell <t>sequencing</t> dataset from Cai et al. showing positioning of expanded TCR CDR3 and DPB1*04/S 167 CDR3α clonotypes shared between S-specific AIM + memory CD4 + T cells, or expression of CCR6 (CCR6), DPP4 (CD26), IL22 (IL-22), CXCR4 (CXCR4), and NR4A1 (Nur77). ( E ) AIM (OX40 + CD137 + ) responses among PBMCs collected from a randomized clinical trial of mRNA-1273.214 WT/BA.1 COVID-19 bivalent booster vaccination ( n = 33 individuals). FACS plots and graphs show frequencies of CD26 hi CD39 − and CD26 − CD39 + cells among bulk or AIM + subsets of CCR6 + cTfh and Tmem populations. Statistics assessed by two-tailed Wilcoxon matched-pairs signed rank test. **** P < 0.0001.
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    Image Search Results


    ( A ) Volcano plot of selected genes enriched in sentinel AIM + (CD25 + OX40 + ) CCR6 + cells relative to sentinel AIM − (CD25 − OX40 − ) CCR6 + CD4 + T cells identified by bulk RNA-seq ( n = 1 individual). Dotted line indicates criteria threshold of −log 10 (0.05) FDR and at least a log 2 fold change of −1 or 1. ( B ) FACS plots and ( C ) frequency of CD26 hi CD39 − and CD39 + populations among bulk or AIM + (CD25 + OX40 + ) Tmem ( n = 6 individuals). ( D ) UMAP plots of the single-cell sequencing dataset from Cai et al. showing positioning of expanded TCR CDR3 and DPB1*04/S 167 CDR3α clonotypes shared between S-specific AIM + memory CD4 + T cells, or expression of CCR6 (CCR6), DPP4 (CD26), IL22 (IL-22), CXCR4 (CXCR4), and NR4A1 (Nur77). ( E ) AIM (OX40 + CD137 + ) responses among PBMCs collected from a randomized clinical trial of mRNA-1273.214 WT/BA.1 COVID-19 bivalent booster vaccination ( n = 33 individuals). FACS plots and graphs show frequencies of CD26 hi CD39 − and CD26 − CD39 + cells among bulk or AIM + subsets of CCR6 + cTfh and Tmem populations. Statistics assessed by two-tailed Wilcoxon matched-pairs signed rank test. **** P < 0.0001.

    Journal: Science Advances

    Article Title: Deconvoluting TCR-dependent and -independent activation is vital for reliable Ag-specific CD4 + T cell characterization by AIM assay

    doi: 10.1126/sciadv.adv3491

    Figure Lengend Snippet: ( A ) Volcano plot of selected genes enriched in sentinel AIM + (CD25 + OX40 + ) CCR6 + cells relative to sentinel AIM − (CD25 − OX40 − ) CCR6 + CD4 + T cells identified by bulk RNA-seq ( n = 1 individual). Dotted line indicates criteria threshold of −log 10 (0.05) FDR and at least a log 2 fold change of −1 or 1. ( B ) FACS plots and ( C ) frequency of CD26 hi CD39 − and CD39 + populations among bulk or AIM + (CD25 + OX40 + ) Tmem ( n = 6 individuals). ( D ) UMAP plots of the single-cell sequencing dataset from Cai et al. showing positioning of expanded TCR CDR3 and DPB1*04/S 167 CDR3α clonotypes shared between S-specific AIM + memory CD4 + T cells, or expression of CCR6 (CCR6), DPP4 (CD26), IL22 (IL-22), CXCR4 (CXCR4), and NR4A1 (Nur77). ( E ) AIM (OX40 + CD137 + ) responses among PBMCs collected from a randomized clinical trial of mRNA-1273.214 WT/BA.1 COVID-19 bivalent booster vaccination ( n = 33 individuals). FACS plots and graphs show frequencies of CD26 hi CD39 − and CD26 − CD39 + cells among bulk or AIM + subsets of CCR6 + cTfh and Tmem populations. Statistics assessed by two-tailed Wilcoxon matched-pairs signed rank test. **** P < 0.0001.

    Article Snippet: Memory CD4 + T cells responsive (OX40 + ) or nonresponsive (OX40 − ) to stimulation were sorted for transcriptional analysis using the 10x Genomics Chromium single-cell RNA sequencing (scRNA-seq) platform.

    Techniques: RNA Sequencing, Sequencing, Expressing, Two Tailed Test